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Book Categories |
Preface | ||
1 | Introduction | 3 |
Why Employ Molecular Genetic Markers? | 5 | |
Why Not Employ Molecular Genetic Markers? | 15 | |
2 | History of Molecular Phylogenetics | 16 |
Debates and Diversions from Molecular Systematics | 17 | |
Molecular Phylogenetics | 40 | |
3 | Molecular Tools | 44 |
Protein Assays | 44 | |
DNA Assays | 53 | |
References to Laboratory Protocols | 90 | |
4 | Interpretive Tools | 92 |
Categorical Subdivisions of Molecular Genetic Data | 92 | |
Molecular Clocks | 100 | |
Procedures for Phylogeny Reconstruction | 109 | |
Gene Trees Versus Species Trees | 126 | |
5 | Individuality and Parentage | 141 |
Genetic Identity Versus Non-Identity | 141 | |
Parentage | 168 | |
6 | Kinship and Intraspecific Phylogeny | 190 |
Close Kinship and Family Structure | 190 | |
Geographic Population Structure and Gene Flow | 204 | |
Phylogeography | 233 | |
Microtemporal Phylogeny | 248 | |
7 | Speciation and Hybridization | 252 |
The Speciation Process | 257 | |
Hybridization and Introgression | 280 | |
8 | Species Phylogenies and Macroevolution | 306 |
Rationales for Phylogeny Estimation | 307 | |
Special Approaches to Phylogeny Estimation | 331 | |
Prospectus for a Global Phylogeny | 350 | |
Special Topics in Molecular Phylogenetics | 352 | |
9 | Conservation Genetics | 361 |
Issues of Heterozygosity | 362 | |
Issues of Phylogeny | 370 | |
Literature Cited | 399 | |
Index to Taxonomic Genera | 501 | |
General Index | 507 |
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