Phylogenetic Analysis of DNA Sequences Book

1. Phylogenetic Inference, DNA Sequence Analysis, and the Future of Molecular Systematics, Michael M. Miyamoto and Joel Cracraft
2. DNA Sequencing: Strategy and Methods to Directly Sequence Large DNA Molecules, Jerry L. Slighton, David R. Siemieniak, and Leang C. Sieu
3. The Application of Automated DNA Sequence Analysis to Phylogenetic Studies, Robert J. Ferl, et. al.
4. Computer Alignment of Sequences, Michael S. Waterman, Jana Joyce and Mark Eggert
5. Aligning DNA Sequences: Homology and Phylogenetic Weighting, David P. Mindell
6. Relative Efficiencies of Different Tree-Making Methods for Molecular Data, Masatoshi Nei
7. Compositional Statistics Evaluated by Computer Simulations, Arend Sidow and Allan C. Wilson
8. Weighted Parsimony: Does It Work?, Walter M. Fitch and Jia Ye
9. Testing the Theory of Descent, David Penny, Michael D. Hendy and Michael A. Steel
10. Parsimony and Phylogenetic Inference Using DNA Sequences: Some Methodological Strategies, Joel Cracraft and Kathleen Helm-Bychowski
11. Evolutionary Analysis of Length-Variable Sequences: Divergent Domains of Ribosomal RNA, Allan Larson
12. Statistical Methods for Testing Molecular Phylogenies, Wen-Hsiung Li and Manolo Gouy
13. Discriminating Between Phylogenetic Signal and Random Noise in DNA Sequences, David M. Hillis
14. When are Phylogeny Estimates from Morphological and Molecular Data Incongruent?, David L. Swofford
15. Congruence Among Data Sets: A Bayesian Approach, Ward C. Wheeler